rs257432629 SNP Detail

Summary

• ID
  rs257432629
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:29230892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGG GATTAAAACC ACCACCCACC
  S
  GGCTTCATTT GTTTCTTTTA GTGTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325789625	CHEV_19_29327982	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257432629					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:29230892 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10735	CpG island 10735	1037 bp distal
Gm41829	predicted gene, 41829	1167 bp upstream
Gm59364	predicted gene, 59364	1991 bp upstream
Jak2	Janus kinase 2	within coordinates
Rr405910	regulatory region 405910	354 bp upstream
Tssr155780	transcription start site region 155780	1827 bp downstream
Tssr155781	transcription start site region 155781	1638 bp downstream
Tssr155782	transcription start site region 155782	1625 bp downstream
Tssr155783	transcription start site region 155783	1591 bp downstream
Tssr155784	transcription start site region 155784	1179 bp downstream
Tssr155785	transcription start site region 155785	1050 bp downstream
Tssr155786	transcription start site region 155786	1007 bp downstream
Tssr155787	transcription start site region 155787	902 bp downstream
Tssr158749	transcription start site region 158749	1387 bp upstream