rs257452009 SNP Detail

Summary

• ID
  rs257452009
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69661214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGGCTTGTT CCAACAACTG TAATGGAGGG
  CGTTCCCACT TTCCAAAGAC AACCAGGTCT ATGTCACTGG ACAGAAGAGA AACTGTGTCA
  GTCACAACAA ACCTCACCAG GTGGCCTCCC ATGGGAAGGC CAGCACCACA GCATGTTGCC
  K
  CTTATCAACA AGGTCCCCTA AGTACCTAAG CCATGAGCCC TGAATGCAGC TCTTGAGTCA
  TCTAAGTATA TAAAGCCAGA GTGAAAAGGG CCTCAGAGTC CCAGGAACCA ACAGGTGACA
  GGATAAACTG TTTTCAGCAG TCTATTCTAT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324404653	CHEV_13_69651973	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257452009					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69661214 () rs orientation: forward

Symbol	Name	Function Class
Gm48676	predicted gene, 48676	905 bp upstream
Rr277031	regulatory region 277031	1787 bp proximal
Tent4a	terminal nucleotidyltransferase 4A	within coordinates