rs257473039 SNP Detail

Summary

• ID
  rs257473039
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12501937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGAAAAG ATACCCAAGA
  AGCTTCCCTT CCCTCCCACC CTTTCATCCG GTCTCCCCTG TATTAGCACC CTTTTCTCAC
  TGCTCTGACC AAGTACCTTA CAAAGACAAT GTGAGGAAGG AGACTCTATT TTGGCTCACA
  TAAGACTTTC ATGGTAGGGA AACCACAGTG GTGGGGGCAT GAGCTGCGGG CCTTGGTGCA
  Y
  CCTCAGTCAG GAAGCGGAGA GAGATGGACA GTGGGGTGCA GTGGCCTCCT CATCTCTGTT
  CACTTTAGGA CCCTGGATAG CAGCACTAAG TTCCCTCGGG GTGGGTCTTC CTTTCTATGT
  TAATCCTGCC TGAAGACGCC AAAGTGTGCA GTGCTCACAA AGCTCCGCAG TCATGAAGGC
  CCTGCTGGCT CCCTGACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322498718	CHEV_8_12451937	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257473039					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12501937 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	1994 bp upstream