rs257542177 SNP Detail

Summary

• ID
  rs257542177
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39369729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atatgtagg aaatttaccg gggaacatgg
  gggaagtcgg aagcatggag gtaagcagag ataaccagcc atttgacaga acttaggcta
  gaataatggg ttaataattc atgagctagt cagaggatgt cttagccaag gtttttattc
  Y
  tgcacaaaca tcatgaccaa gaagcaagtt gggaggaaag gatttattca aattacattt
  ccacattgct gttcatcact aaaggaagtc aggactggaa ctcaagcagg tcaggaagca
  ggagctaatg cagaggccat ggagggatgc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228530	CHEV_2_39335237	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257542177					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39369729 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	1869 bp proximal
Rr373076	regulatory region 373076	within coordinates