rs257594972 SNP Detail

Summary

• ID
  rs257594972
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:116069950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cgagcctgt agccccacac ttcaggtatg
  caggcccagg attgaaccac aggatcctac acactagaca ggcacagagc tgcatccccT
  GGCCTGGCCC AGGTCTGTGT GAGAGGTCTC CGACTGCTGA AGCTGAGTAG GTTCAGTACA
  Y
  ACGTCATAGA CTGCGAATCC TGTTCTTTAC TGAAAACCAT TGTCATGTCT TGCTCTACCC
  AGAAACAAAT TTCACCACCT CGAGAAGCAT AATCTAGAGA TGCTCACATT TGTCTTTCCT
  CTGTCATCAG TAAATATGAA TAACTTCCAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323209805	CHEV_9_116150000	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257594972					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:116069950 () rs orientation: forward

Symbol	Name	Function Class
Gm31410	predicted gene, 31410	within coordinates
Rr366687	regulatory region 366687	1183 bp upstream
Rr383972	regulatory region 383972	7 bp downstream
Rr688005	regulatory region 688005	491 bp proximal