rs257605228 SNP Detail

Summary

• ID
  rs257605228
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90879498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGGTTTTT TTTTTTTTTA AGAAGGTAAA
  AAAAGAAAGG AAAGGAAAAA AAAGACGGAG TGTCTTGATG AGATGATGAG AGAAGAGACG
  TAGTGGAAAC TGCAGGCTAT AAGCAAAGAC GCCATCTCAA GGAGGGGTCT GGGGGCGTCC
  Y
  TTGCCTCCTT GTTGGCCTAT AAAAGATAAG CAGGCAGGCA GACCTCACCT CACGCCCAGG
  CAGCCTTATC GCCACACTCA AGGGACAGAG AGAGGGTGAG TAACTTGGCA GTGCTGGAGA
  GGGCTGGGTG TTGCTGTGAC TTCCAGCTTC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319838420	CHEV_1_92848353	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257605228					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90879498 () rs orientation: forward

Symbol	Name	Function Class
Mlph	melanophilin	634 bp downstream
Prlh	prolactin releasing hormone	1332 bp upstream
Rr415503	regulatory region 415503	within coordinates