rs257648182 SNP Detail

Summary

• ID
  rs257648182
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTCAGGAG CCCATCAGCT
  CTAAGAAGGC AAACTGAGTT ATTCAGCTCA TACTGCAATG CTAACCCTGG TTGAAATGTG
  CTTGACTCCT TATCAGTGAC TCTGGTGACA GTCTGTTTCC CCCTCATGAG ACTTGCTAGA
  CCCTCTCTCC TCCCAAGCAC CTTAGGATGA AGGCGGAGCC TCCATGGAAT CTTTCTAGGC
  R
  GGTATGGACT GGTTTTTTTG CTCCTCACCT TCCTTCACAG TGAGCAGCAG TCAGCACAAA
  GTCCTCTCGA ATAAGGAAGC CCCCACATAT CGCCTCAGGC TGCTGATCCT TGATCGAAAG
  TAAGGCCATG TAGGGTCGAG AGTGGGGCTT GACTTCATGT CCCCCGATGA TCTCCCCTGA
  AGGGAAAGCC AATCATTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645025	CHEV_14_56879895	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257648182					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498515 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	1111 bp proximal
Tssr128924	transcription start site region 128924	1114 bp downstream
Tssr128925	transcription start site region 128925	1159 bp downstream
Tssr128926	transcription start site region 128926	1175 bp downstream