rs257687410 SNP Detail

Summary

• ID
  rs257687410
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30813702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAACACGTAT TTCATGCCCC AAGGCCCAAG CTGTTGCCTG
  TGTGTTCCAT GATCCCAAAC ACCTCATGGA GGGAATATTA GTATCCATCC ATACTTGACT
  R
  CAAGGAAAGG TGGACTGAAG CCCAGAGACG TGAAGTTACC TACCCAGGAT CACACAGTAA
  AAGACAGCAG AAACAACCTG ACTAGCTCTA CACCCTTAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322139428	CHEV_7_31899296	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257687410					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30813702 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18835	CpG island 18835	1658 bp proximal
Hpn	hepsin	within coordinates
Rr645021	regulatory region 645021	within coordinates
Rr645022	regulatory region 645022	995 bp proximal
Tssr71932	transcription start site region 71932	423 bp downstream
Tssr71933	transcription start site region 71933	950 bp downstream