rs257769736 SNP Detail

Summary

• ID
  rs257769736
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156081139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGAAGCCG GAGGAAGCTG
  ATGGTCATCT TTTCCAAGTA AGTGTCTCCT GTGTCCTCTG CAAATGCATG CTAAGGCATC
  CAGAACACAG ATATTTACAT TGCGATTCAT AACGTAGCAA ATTTACAGTT ATGAAGTAGC
  AATGAAAAGA ATGTTACGGT TGGGGGTCAC CACAACATGA GGAACTCTGT ATTAAAGGGT
  Y
  ACAGCACTAG GAAGGGTGAA TTTGAAAGGA CTTGGAGGGC CTAAGCTGGG CTGCTTAGCT
  ATGCCTCCGC CATCATAGCC AGGAAGGCCT CAAGGTAGAC TTCTGCCCCT GCCCCACCTC
  TTAAGGACTT TGTGTATGGC TGTTCCAACT ATAGACTTTA TCAGTTGAAA AGCATAAAGC
  CAGGCCAAGT GGAAAGGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321444425	CHEV_4_155370791	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257769736					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156081139 () rs orientation: forward

Symbol	Name	Function Class
Sdf4	stromal cell derived factor 4	within coordinates
Tssr40753	transcription start site region 40753	326 bp downstream