rs257796804 SNP Detail

Summary

• ID
  rs257796804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85591490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGGGCAAT GGGTTCAGAC ACCAGAGGCT
  TCCTCAATCT GTTTGGTAGG CACAGGCCTT TCTCACTGAA CCTCTGTCTC CACTTCCCCC
  TCCCCCACCC CGCCCTGTGC CCTATGGCTC TAGTGGCCTG TGGCCAGGGT GGGTGGGGAG
  Y
  GGCTGGGCCT CCTCCAGAAC ACGGACACCG CAGGGTGAGG TAGTAGGTTG TGTGGTTTCA
  GGGCAGTGAT GTTGCCCCTC CGAAGATAAC TATACAACCT ACTGCCTTCC CTGAGGCGCC
  CAGGGACACA GCTACATGGA GGCCCCCGCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325042863	CHEV_15_85537719	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257796804					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85591490 () rs orientation: forward

Symbol	Name	Function Class
Gm34622	predicted gene, 34622	1582 bp downstream
Lncppara	long noncoding RNA near Ppara	within coordinates
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	within coordinates
Mirlet7b	microRNA let7b	30 bp upstream
Mirlet7c-2	microRNA let7c-2	592 bp downstream
Rr507292	regulatory region 507292	880 bp distal
Rr507293	regulatory region 507293	within coordinates
Rr507294	regulatory region 507294	1229 bp proximal