rs257948594 SNP Detail

Summary

• ID
  rs257948594
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33608435 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttctttct ttctttcttt ctttcttctt
  caagacaggg tttctcttat agccctggct gtcctggaac tcactttgta gaccaggcta
  gcctcaaact gagaaatccg cctgcctctg cctcccaagt gttgggatta aaggtgtgtg
  Y
  caaccactgc ccagcgtgtt cttcttccac ccttcaacac cccttttttt cctccctttc
  aaccccccaa tgctaaataa gagagaaagg aaggatggag ggaagagagg aaagggaaga
  gatcctgaat ctaatttctt cctcaacaac                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325139903	CHEV_16_33788151	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257948594					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33608435 () rs orientation: forward

Symbol	Name	Function Class
Gm15657	predicted gene 15657	within coordinates
Gm15658	predicted gene 15658	within coordinates
Rr326609	regulatory region 326609	36 bp distal
Tssr140846	transcription start site region 140846	1046 bp upstream
Tssr140847	transcription start site region 140847	933 bp upstream
Tssr140848	transcription start site region 140848	889 bp upstream