rs257960007 SNP Detail

Summary

• ID
  rs257960007
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44378664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTCTGT GAATTCACAT
  GTGTGTGGGT GCACAGGTGC ATATGTGTGC ATGTATGTGT GTGCCTGCTC ATGGGGGGGG
  GCTGAGGCTG ACACTGGGTG TCTTCCGTGA TCGCTTTCCA CCTTGCTCAC CCATTCCAGC
  TAATCTAGCC AGGCAGTTTA CCCTTGGGAT CTCCTGCCTT TGCCCCTTGG GTGCTGAGGT
  R
  CATGCCTGCC TAGCCTTTGA CACACATCCG GGGGATCTGA ACTCAAGGCT TCACACTTGC
  GCAGTAAGTG CTTTATCCAT GAAGCCATCT CTCCAGACCT CCAACATGAT TCTAGGGAGC
  TGAGTTGACT CGTTCAAGGA ATATGATCAG CATCCCGACA GCTTTCTCTG GGCGGCATCT
  TCCTCCTCCA GCATGGATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100959	CHEV_4_44391536	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs257960007					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44378664 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	1891 bp proximal
Gm68903	predicted gene, 68903	within coordinates