rs258061785 SNP Detail

Summary

• ID
  rs258061785
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:66682886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTTGAGA TAGATACCCA TTGTTGAGGC
  TTCCTTCTGT CCACTGGAGC AACAGCAGAA ATTTGTCTTC AGAAAAAAAA AAAGAGGGAG
  TTCCATGTCT TGACCTTGTA GTTTTACCTC ACCATATTTA ACACTGCTAG AAATTTTCTG
  M
  TGAGAATGTG TGTGTAATTA GGCAGGCTTT GCCTGGCTAG GAATGGTATT AAAACAGCCA
  CTTAGCTACA TGTTGCATAT AATGTGCACt tcttacaaat atcacagaac ttaagcttct
  tctgataaag gaaaaaataa gcagactttc                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325003326	CHEV_15_66642599	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258061785					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:66682886 () rs orientation: forward

Symbol	Name	Function Class
Rr503566	regulatory region 503566	640 bp distal
Rr503567	regulatory region 503567	63 bp distal
Rr503568	regulatory region 503568	270 bp proximal
Rr503569	regulatory region 503569	868 bp proximal
Rr503570	regulatory region 503570	1546 bp proximal
Sla	src-like adaptor	within coordinates
Tg	thyroglobulin	within coordinates
Tssr131484	transcription start site region 131484	1197 bp upstream
Tssr131485	transcription start site region 131485	1323 bp upstream
Tssr134583	transcription start site region 134583	894 bp upstream
Tssr134584	transcription start site region 134584	410 bp upstream
Tssr134585	transcription start site region 134585	1021 bp downstream
Tssr134586	transcription start site region 134586	1075 bp downstream
Tssr134587	transcription start site region 134587	1150 bp downstream
Tssr134588	transcription start site region 134588	1600 bp downstream
Tssr134589	transcription start site region 134589	1622 bp downstream
Tssr134590	transcription start site region 134590	1648 bp downstream
Tssr134591	transcription start site region 134591	1679 bp downstream