rs258078656 SNP Detail

Summary

• ID
  rs258078656
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55205371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCCAGA GGATGCAGGT
  GCTGCTTTGA ATGCCTGGCA GGCCCAGAGA TTTACACCAG TTGGCCCCAG GCTCCAGATT
  CCATGGATAG GGGCTCTGCA GACTGACCCC TTCCCAAGTG CCCTTCTCTA ACGCTCCTGG
  GGCCTTATAC TCACACTCAT GCCCTCCTTT GTGGCACCAT CAAGCACCCA AGGCCCAGAG
  A
  CAACCCCTGT CCTCCAGGGC TGCTGTCTTT TCAGAGGTCG TAGATGTTGG GTCTTTAGCA
  GGTCATGCCT GTTATAACTA AGTAGACATT GTGTTCAGGA GGCAAAGCCA GACTCCCCTG
  CTCTGGCTTT CCCCTACACC CTCACACCCA GGAACACTCT CCCTGCTACC AGCTCCCACC
  CTATCTACTG TCACCTCTCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324641226	CHEV_14_55586751	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258078656					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55205371 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	844 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	987 bp upstream
Rr407057	regulatory region 407057	131 bp distal
Rr492378	regulatory region 492378	1320 bp distal
Rr492379	regulatory region 492379	783 bp distal
Rr492380	regulatory region 492380	321 bp proximal
Rr492381	regulatory region 492381	1747 bp proximal
Tssr4419	transcription start site region 4419	1612 bp upstream
Tssr4420	transcription start site region 4420	1499 bp upstream
Tssr4421	transcription start site region 4421	1493 bp upstream
Tssr4422	transcription start site region 4422	1441 bp upstream
Tssr4423	transcription start site region 4423	1415 bp upstream
Tssr4424	transcription start site region 4424	1377 bp upstream
Tssr4425	transcription start site region 4425	1264 bp upstream
Tssr125718	transcription start site region 125718	758 bp upstream
Tssr125719	transcription start site region 125719	837 bp upstream
Tssr125720	transcription start site region 125720	867 bp upstream
Tssr125721	transcription start site region 125721	887 bp upstream
Tssr125722	transcription start site region 125722	1312 bp upstream
Tssr125723	transcription start site region 125723	1381 bp upstream
Tssr125724	transcription start site region 125724	1393 bp upstream
Tssr128741	transcription start site region 128741	1947 bp upstream
Tssr128742	transcription start site region 128742	1329 bp upstream
Tssr128743	transcription start site region 128743	1306 bp upstream
Tssr128744	transcription start site region 128744	977 bp upstream
Tssr128745	transcription start site region 128745	692 bp upstream
Tssr128746	transcription start site region 128746	38 bp downstream
Tssr128747	transcription start site region 128747	67 bp downstream
Tssr128748	transcription start site region 128748	86 bp downstream
Tssr128749	transcription start site region 128749	149 bp downstream
Tssr128750	transcription start site region 128750	168 bp downstream
Tssr128751	transcription start site region 128751	185 bp downstream
Tssr128752	transcription start site region 128752	238 bp downstream
Tssr128753	transcription start site region 128753	427 bp downstream
Tssr128754	transcription start site region 128754	506 bp downstream