rs258177772 SNP Detail

Summary

• ID
  rs258177772
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126388165 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAAAGACA TCCCATTAGT
  GAGGTGGGGT ACTGAATTTA GACTTGGGCT TTACAGCCAG TGATGAGGTA GGTTTTGAAC
  CTCCGTACCC CCAACAGCCT CCATCTGCTG CTGATGCCCT TCACTGGCTA CCACTGGCAA
  ACATCACCAT GTGAGACACA GCACATTTTC CCCCCACAGA GACTCCTATG AGTCTTAAAA
  S
  AGGGTCTTTG GGGGGAGGGG GAGGACTCTC CAGGATTTCT TGGCATATAC CTCTACCAAA
  CGCTCTCACT TCCTGCTGCA CAGCTCCTCT CCAATTTGCT TGGGCGGCCA AACATCTTGC
  TTCTGTGTCT AGATGGTAGA GCCTGGCGTT ACCTTCTTGA ATGTCAGTGG GAACCTGGAA
  CTGACAGACA AAGGTCAGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322860910	CHEV_8_128185326	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258177772					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126388165 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	118 bp proximal
Gm30871	predicted gene, 30871	within coordinates
Rr180110	regulatory region 180110	1965 bp distal
Rr180111	regulatory region 180111	1036 bp proximal
Rr183380	regulatory region 183380	598 bp distal