rs258239126 SNP Detail

Summary

• ID
  rs258239126
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95720459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACGT ATAGCTAATG GTGGGGTGGG
  R
  TGTTATTGGG GACCCTAGGA AAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809821	CHEV_8_97517731	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258239126					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95720459 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Rr668146	regulatory region 668146	1861 bp distal
Tssr78941	transcription start site region 78941	1129 bp downstream
Tssr78942	transcription start site region 78942	957 bp downstream
Tssr78943	transcription start site region 78943	894 bp downstream
Tssr78944	transcription start site region 78944	407 bp upstream
Tssr78945	transcription start site region 78945	534 bp upstream
Tssr78946	transcription start site region 78946	562 bp upstream
Tssr78947	transcription start site region 78947	862 bp upstream
Tssr78948	transcription start site region 78948	914 bp upstream
Tssr78949	transcription start site region 78949	962 bp upstream
Tssr78950	transcription start site region 78950	1009 bp upstream
Tssr78951	transcription start site region 78951	1760 bp upstream
Tssr78952	transcription start site region 78952	1852 bp upstream
Tssr78953	transcription start site region 78953	1873 bp upstream
Tssr78954	transcription start site region 78954	1919 bp upstream