rs258260209 SNP Detail

Summary

• ID
  rs258260209
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:47792903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATAGATAG ATAGATAGAT
  AGATGACAGA TTCTCTCAAT GAACACCTTG AGACTAATAT ACATGGATCA AAGGCAATCT
  GTCAGGAGAA AATAAAGACC ATCTTATGAA GGTATTGGTA GTAGAGATGA TGGAAATGGC
  AGGATGATTC TAAGGGTGTT GGCAACCAGA AGAAAGAAAC TTCCATCAGA TGAGACAGAC
  R
  GGAAGTGATG CAAATGGAGT TTGCATGAAG GTGGGGCATC AGGTTCGGGG TTCCTTGAGA
  TGTGTTTGGG ATGTTTGTTA TGTCCAAATG TGGACGGGAT TTGAAATTAA TTTTGTGTTT
  ATGATAATGT ATGTGTTTGT ATGTGAGTGT GTTCGTGTGT GTGTGTGTGT GTGTGTGTGT
  ACAGGTGTGT GCCTAACACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324337171	CHEV_13_47734796	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258260209					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:47792903 () rs orientation: forward

Symbol	Name	Function Class
D13Mit90	DNA segment, Chr 13, Massachusetts Institute of Technology 90	404 bp distal
Rr283868	regulatory region 283868	1704 bp distal