rs258311409 SNP Detail

Summary

• ID
  rs258311409
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118009947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGGAAACT GATACCCTGC AGTTCCTCTG
  GCTCAGAGTA ACCAATGTAG GGCAAGATGA CCAAGACCTG TGACCTTTCA AGATGAGAAG
  GAGGTCCAGC ACAAGTTATG GAAGAATCTA ACTCTGTCTG GTGGGTCCTG TGAGCTTCCC
  R
  GTCCTCTCTC CATCATCATG GAAGAGCCAG GATTCCAGGT CCACTCTCCC TGTAGCAGGG
  CAAGCTGGCC AGCCTGGGTC TGCACAACTA ATTAGCATTT GCACATCCTA AAGATGGCCA
  AGAGGGAGTT GGAGCCACAG CTCTGTAACA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321660970	CHEV_5_118321891	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258311409					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118009947 () rs orientation: forward

Symbol	Name	Function Class
Gm30360	predicted gene, 30360	within coordinates
Gm37028	predicted gene, 37028	931 bp upstream
Nos1	nitric oxide synthase 1, neuronal	within coordinates