rs258363910 SNP Detail

Summary

• ID
  rs258363910
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102986506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAGAAATA GCCAAGGGCA
  AATAGCCAAG CCCTTCTTGA AGAACATGAA GAAACATGGG TGGTGGGGTA GCTATATGTT
  CCGACAGCGA TCTTTGGTGT AAAGATAACA ACATACATCA GGTTTTAGCC CTTGATGTAT
  TTCCTCTCTG CAGAGCTTTG GAACCTTTCC GCAGGTGCAC CAGGAGACAG GTAGAGAACA
  R
  TCCTATCTGC ACCATTTGCA AAGCAGAAAG AAGGCTGGGT GCTCTTTCCA TGGTTAATTT
  CCTGGCTCTG CTAAGGTACC GTGGTTATGT AAGATGTTAT CGTGGGGGCT GTTGGATGAA
  GAGACACAGA AACTTCCTGT ACTATTTTTT GAAACCTCTA TGTAGTCTAA AACTATTTCA
  GGCTTTAAAA ACTGGACACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160331	CHEV_9_103011637	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258363910					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102986506 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22229	CpG island 22229	1828 bp proximal
D9Mit276	DNA segment, Chr 9, Massachusetts Institute of Technology 276	1457 bp proximal
Gm46128	predicted gene, 46128	within coordinates
Rr401633	regulatory region 401633	464 bp downstream