rs258364937 SNP Detail

Summary

• ID
  rs258364937
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:108088395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATTCTTTG TTCATCCTAG CTTGGTGCCT
  GCCTTGGTGG CTGGAGCTGT CTTATGCTTA GGACTCATAa aatcacatca aatcaaatca
  aatcCAGGTA TCACAGCTGG GGAAGAGGAA GGCAGATAGG GACCTGCTGA TCACCATGCC
  M
  CCCACAGACC TGCCATCCAG AAGGGACCTA GATACCTGCT TGTAGCTATT CTACATCACT
  TAGCATGAAT GTAGTATGTc acccagaggc ctgtaaacca cgtggccagc ctacagaagg
  aaccaccata atgtgtgagt atgtggtggt                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320453206	CHEV_2_108098207	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258364937					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:108088395 () rs orientation: forward

Symbol	Name	Function Class
D2Mit58	DNA segment, Chr 2, Massachusetts Institute of Technology 58	1579 bp proximal
Gm13912	predicted gene 13912	within coordinates
Gm57698	predicted gene, 57698	81 bp downstream