rs258375625 SNP Detail

Summary

• ID
  rs258375625
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:110447793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGTTTTCTA GCCACCTCAC ATAATATGga
  tactccttga cttgataggg ctctgtccca gtttcagtct aagttgaaaa catcttaaag
  taaaagtgca tctactatct ctcctgccac aatacatagc AGGTTCTTTT CTGTTTACTT
  R
  ATTTGTCAAA CAGCTGATTG AGATACCAAC TAGGGGCCTA TGTATCCATA TGGTGACTTT
  AGTTTTCCCC TGCATATACA GTCAGAAAAA TACTTCTAAA TTGTTGGTTT TGTATAATTT
  GTACTCAATA AATATTTGTT GTTCCTGTTA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321257621	CHEV_4_110263201	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258375625					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110447793 () rs orientation: forward

Symbol	Name	Function Class
Agbl4	ATP/GTP binding protein-like 4	within coordinates
Tssr38375	transcription start site region 38375	1179 bp downstream