rs258434584 SNP Detail

Summary

• ID
  rs258434584
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175460374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA CAGGATTTCA TTCTTCTTTA
  T
  CGCCAAACAC TACTCCATTG TGTGT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320151899	CHEV_1_177562939	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258434584					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175460374 () rs orientation: forward

Symbol	Name	Function Class
Kmo	kynurenine 3-monooxygenase	within coordinates
Rr396618	regulatory region 396618	689 bp downstream
Rr423839	regulatory region 423839	618 bp distal
Tssr10313	transcription start site region 10313	830 bp downstream
Tssr10314	transcription start site region 10314	807 bp downstream
Tssr10315	transcription start site region 10315	784 bp downstream
Tssr10316	transcription start site region 10316	751 bp downstream
Tssr10317	transcription start site region 10317	714 bp downstream
Tssr10318	transcription start site region 10318	707 bp downstream
Tssr10319	transcription start site region 10319	697 bp downstream
Tssr10320	transcription start site region 10320	675 bp downstream
Tssr10321	transcription start site region 10321	657 bp downstream
Tssr10322	transcription start site region 10322	648 bp downstream
Tssr10323	transcription start site region 10323	623 bp downstream