rs258470893 SNP Detail

Summary

• ID
  rs258470893
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110676002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GGAGGCATGA TGTGCCCCCC ATGGCCATTG AAGAGCTGAT TTGAACGATG
  M
  CGTCCCATTG TGGGTGAAAA TCTATCCTGG ATAACTCCTG GACCAGTACC           
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322401254	CHEV_7_118220309	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258470893					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110676002 () rs orientation: forward

Symbol	Name	Function Class
Eif4g2	eukaryotic translation initiation factor 4, gamma 2	within coordinates
Gm23262	predicted gene, 23262	568 bp upstream
Tssr74285	transcription start site region 74285	1957 bp upstream
Tssr74286	transcription start site region 74286	1126 bp upstream
Tssr74287	transcription start site region 74287	619 bp upstream
Tssr74288	transcription start site region 74288	601 bp upstream
Tssr74289	transcription start site region 74289	564 bp upstream
Tssr74290	transcription start site region 74290	397 bp upstream
Tssr74291	transcription start site region 74291	1326 bp downstream
Tssr74292	transcription start site region 74292	1709 bp downstream
Tssr74293	transcription start site region 74293	1761 bp downstream