rs258498501 SNP Detail

Summary

• ID
  rs258498501
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:24359289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tccttaagt gctgagccat cgctccagcc
  tcTGTTTCTC TTCATTTTTG CCATAAATTC ATTAATCGTA AGTTTATCCA CCAAGGTGCA
  GAGCAGCCTA GAGGCCACCC TCAGATCTTT TCTGCTCTTT TCTCTTCTGA GTCCTCTCCA
  Y
  GCCTTACAAG TCTGGATTCC ATCTCCAGCC TGCACCACTG GTGTGCAGAA ATCATGTTCC
  CATGACAACA GCCCTGTGAC GCTAGAGCCA CGATTATCTG AACTTTACAA GCGAAGGGCA
  AGAAACCATT TGCCGGAGCA GGTTTCCCAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322120863	CHEV_7_25444883	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258498501					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:24359289 () rs orientation: forward

Symbol	Name	Function Class
Gm4598	predicted gene 4598	1430 bp upstream
Rr643537	regulatory region 643537	607 bp distal
Rr643538	regulatory region 643538	1672 bp proximal