rs258508733 SNP Detail

Summary

• ID
  rs258508733
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:63085402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCTCCAA GTTCTTTCAA
  ATGTAGTATC TCATTGAGGC TCGCACACTG CCTGCTGTTA GTCATTAGTC ATCCCGGCGA
  AAGCATTTTG GTCCCAGCAG TAGCTACTTG CTTCCCTTTC TTGAGTCCTC ACGTTCTGAC
  CTATTCTTTC TGTTCATACA ACATAAGTGA AATGTCCTTT TATATACAGC TGGGTTTCTT
  W
  AAAACAGTGT AGGAAATACA TAAATATGGT AAATTATTTG CAGATTAGAA TACCAAATTA
  TCTCACATAT TTCTTATTTT ATCAAAACAT ACAAGATTGA AGCTCAATGG GTTTTATAAG
  TCTTAGTTTT CATAATACCT TCTAAGGAAG AGAAAGATGT AGGTTATACA AAGACTTGGA
  AAAAAGAATT ACCTAGGTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323333186	CHEV_10_62712371	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258508733					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:63085402 () rs orientation: forward

Symbol	Name	Function Class
Gm19337	predicted gene, 19337	1309 bp upstream
Gm66860	predicted gene, 66860	within coordinates
Herc4	hect domain and RLD 4	within coordinates
Rr432770	regulatory region 432770	1801 bp distal