rs258510938 SNP Detail

Summary

• ID
  rs258510938
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:118354258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGAG GGGGCTAATT CATATTTAGA
  W
  TCCCACTCTA GAGTTCAGGA GACTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320901478	CHEV_3_118263527	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258510938					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:118354258 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13752	CpG island 13752	1423 bp proximal
Dpyd	dihydropyrimidine dehydrogenase	1520 bp upstream
Rr583905	regulatory region 583905	1054 bp proximal
Rr583906	regulatory region 583906	1582 bp proximal
Tssr31414	transcription start site region 31414	1536 bp upstream
Tssr31415	transcription start site region 31415	1553 bp upstream