rs258526521 SNP Detail

Summary

• ID
  rs258526521
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:72287584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACAACCTTT CAGCCGATAC TATAGCTCTT CCATTCTAAC
  CTCTCTACAG AGAGGTCTTA GGAAATATAT AGTCTCTGAA ACTTAGGTGT ATGGATGTAT
  W
  GTATATATAT ATATATATAT TACTTCAGGG TGTATATTTC TACAATGGTG TTGATTTCTT
  TTGTGGATGT GACAAAGTGA CTTATGATGA ATCCATGGA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320797514	CHEV_3_72184173	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258526521					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:72287584 () rs orientation: forward

Symbol	Name	Function Class
Rr578287	regulatory region 578287	165 bp proximal