rs258533768 SNP Detail

Summary

• ID
  rs258533768
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66057621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGCCGGTA ACTTGCTTTT
  GATTTTCTGG CTTCATTTTG CAACTGAAGT CCATGGTCAA GAGCTTGCAT CTGGACAAAA
  AGAATGAATG AATGAGCTTG CACCTAAACA CAATGAATGA ATGAATGAAT GAATGGCCCC
  GGCAGCCAGT CATTTACAAA TGCAAATTCC ATCTCCTTAG TGAGTGTTAG AGGTCAAGTC
  T
  TTCCCTCCTT GAATAATTTA ACATAGAACC ATTTCCTTCT GGAGCAGCAG GCCCTGGTGA
  AGGCATAGGA GCTCTTGGAT GAGTATCGGA GTAGGGAGTA AGACTAGTTT CTCCAACGGT
  AAGTTCAAAG CTATAGAGTG TTGGGAGTCT CAGGAGGAAG ACACCAACCC TGCTGGGGAC
  CCCATTTCTC TTGTCCTAGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325658639	CHEV_18_66084204	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258533768					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66057621 () rs orientation: forward

Symbol	Name	Function Class
Gm50119	predicted gene, 50119	within coordinates
Rr346800	regulatory region 346800	within coordinates
Rr353053	regulatory region 353053	179 bp proximal
Rr393825	regulatory region 393825	within coordinates