rs258614298 SNP Detail

Summary

• ID
  rs258614298
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165468026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCACTTAA TTGAGGCTGG
  CTTACAGGTT CAGAGGTTCA GTCCATATTA TCATGGTGGG AGGCATGGCA GCATCCAGGC
  AGACACGGTG CTAGGGATGA AGCTGAGAGT TCTATGTCTT GATATGCAAG CAGCAAGGAG
  AGACTGTGTT TAGATGTAGC TTAAGCATAT ATGACCTCAA AGCCCACGCC CACAGTGACA
  M
  ACTTCCTCCA ACAAGGCCAT ACTTACTCCA ACAAGACCAC ACCTACTCCA ACAAGGCCAC
  ACACCCTAAT AGTGCTGCTC CCTGTGGGCC AAGCATTCAA ACACACAAGT CTATGGGAGT
  CATTCCTACT CAAACTAGCA CACATACCCA AAAGTGTCAA TAAAATGGCC ACAGTGTGAG
  GCTCTGACTA AGTGAACGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608495	CHEV_2_165451606	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258614298					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165468026 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569965	regulatory region 569965	779 bp proximal
Rr569966	regulatory region 569966	1842 bp proximal
Rr569967	regulatory region 569967	1956 bp proximal