rs258629514 SNP Detail

Summary

• ID
  rs258629514
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98729177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cactgactc ccactctttg ccgtgaggtg
  tatccaatcg acctcagtca gagtgctgca atgatttgtt ttccggctgt aaatacactt
  tagagagtag gttaattcat aaaGCCCATG CACAATGTGG GCTGAGCAGG GCTTTAGAGC
  W
  TCGTAGGATG GTGCTCAGCG GGATGGAGAA AAGCACAGAG TACCGGTGCT GTGGGTCCCC
  GCGTGGCTTG CATTATGAAG GACAAAGCAA ACAGGGTTCA TTTGGAACTT GGGTTTTGGT
  GGAAAAGAGA GAGGGGCAGA GGCTTTTGTC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321221844	CHEV_4_98507631	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258629514					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98729177 () rs orientation: forward

Symbol	Name	Function Class
Rr376900	regulatory region 376900	within coordinates
Rr595796	regulatory region 595796	1690 bp distal
Rr595797	regulatory region 595797	within coordinates