rs258640771 SNP Detail

Summary

• ID
  rs258640771
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129839932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGGTAAG TGCCCTGACT
  TTAGTGACAA AAAAAAAAAG CTAATTTGGG TACATGTTTT TGACCCATCC TTGCTTGGCA
  TTTTTCCAGT TTGGACAAGT GAAGCAGCCT TGTTCCAAGC TTTTAACCTT AAGGTAAAAA
  GAACATCAGA GACTGTGTAA TCTGACTTAG CAAGATTAGT GATTCTTCTC TTTCCCTCAA
  R
  TGACCGGTTA TTCTAACTCA ATCGTGAACT GGTCTAGTAA TAATTTCAGT ATTAGAGTAT
  CCCAGGGAAG ATAGCAAAAT ATTCTTAATT ACTTACAAAG TTACATTAGA ACACAGCCTC
  CTCTCCCAGA AAGATTGCAG CCTTTCTGTG ATTCTCAAGG TCACCGCCCC CACACCTGGA
  GCTCTAAGTC TAAGCTTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543550	CHEV_10_129441119	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258640771					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129839932 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	within coordinates
Tssr96487	transcription start site region 96487	293 bp upstream