rs258669418 SNP Detail

Summary

• ID
  rs258669418
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:91114679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGTTGGGG GAGTCACAGG
  CCAACATGTT AGAATACAGG GGAGAATACA GCAGGACTGA GAGCAGGGCT GGAGCACAGC
  AGGCCTGAGA GCAGGGGTGA GGCACAGCAG GACTGAGAGC AGGGGTGAGG CACAGCAGGA
  CTGAGAGCAG GGGTGAGGCA CAGCAGGACT GAGAGCAGAG CTGGAGCACA GCAGGACTGA
  A
  AGCAGGGGTG AGACACAGCA GGACTGAGAT CAGGGTGAGG CACAGCAGGA CTGAGAGCAG
  GGGTGAGGCA CAGCAGGACT GAGAGTAGAA CTGGAGCACA GCAGGACTGA AAGCAGGGGT
  GAGGCACAGC AGGACTGAGA TCAGGGTGAG GCACAGCAGG ACTGAGAGCA GGGGTGAGGC
  ACAGCAGGAC TGAGAGCAGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeH	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CE/J	CZECHII/EiJ	DBA/1J	JF1/MsJ	LEWES/EiJ	LP/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	ST/bJ	WSB/EiJ
ss386849462	MGP_WTSI_12_92386345	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeH	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CE/J	CZECHII/EiJ	DBA/1J	JF1/MsJ	LEWES/EiJ	LP/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	ST/bJ	WSB/EiJ
rs258669418					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss386849462	MGP_WTSI_12_92386345	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:91114679 () rs orientation: forward

Symbol	Name	Function Class
Cep128	centrosomal protein 128	within coordinates
Rr268939	regulatory region 268939	within coordinates