rs258687918 SNP Detail

Summary

• ID
  rs258687918
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903631 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGAGAGTA GTGGCTCTCT
  CCAGACCCTG AGCTGCTTCA GAGCAGCATT TGAATTTTGC CTGACTGTGT AGCTGGTAGG
  CAGAGGCATC CTGGACCTCC CAGTTTTGTG CCATGAAAGG CTACATGCAG GTCTCAGACC
  CCATGAGAGA AGTTTCTTTG TGCAGTGAGC AGAACTTGTC TCTAAGTGAA ACTATACCAC
  R
  CCCACATGGG CCCCACAAGA TTCAAGGATT TTTGTGGAAG TTGGAGCGAA ATGACTGTAA
  GAGCCAGAAG TCTAGAAGAA TAGGACCAAA CAATGCCTTC TGGGTATGGT AGGACCTCTG
  CTCTAGTGAG CTCACAGACG CTGCAGTGAA CCCAAGATAA CACCAAGCTC AAGATAACCA
  ACATTCCAGC ACTGGGGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362836	CHEV_17_32821602	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258687918					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903631 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	974 bp upstream
Rr339615	regulatory region 339615	969 bp proximal
Tssr143733	transcription start site region 143733	928 bp upstream
Tssr143734	transcription start site region 143734	953 bp upstream
Tssr143735	transcription start site region 143735	982 bp upstream
Tssr143736	transcription start site region 143736	998 bp upstream
Tssr143737	transcription start site region 143737	1436 bp upstream