rs258807442 SNP Detail

Summary

• ID
  rs258807442
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7778920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAATCAGA ACAGAACACT
  TAGGGCCAGA TGCCTTTTGC CAGTTCCCAG GTAGGTGTCT TCTAATCAGT TCTATCCTGA
  GTACAGGGTA CTCAGCCCTA GACTCCACCC CCACCACACA CACACACACA CACACACACA
  CACACACTTC CCTTGTTAAT TACAAAGCCC TGGGGGGGTT TCCTTGGGTT TGATTGCCCC
  M
  CACACACACA ATGGCAGGGG GTTCCGTGGG GGAAGGGTAG CGTCAGACAG CACTCTCTTG
  TGAGCTCTCA GAAGTCCTTA CCTTTACATT TGGTTAGCAT GCTAGAAGCA GGCTCCCCAA
  GCCCTCCTCA GTTTGAATAC AGTGCTAGGG CAATACTTTA CCTATGCTTG CCTACGTATT
  ATACTAGATG CTACAAAAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325888371	CHEV_X_7489807	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258807442					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7778920 () rs orientation: forward

Symbol	Name	Function Class
DXImx15	DNA segment, Chr X, Immunex 15	1076 bp proximal
Rr689690	regulatory region 689690	1997 bp distal