rs258878230 SNP Detail

Summary

• ID
  rs258878230
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83727786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGAGAGA ACTTCAGTCA GGGAATACCT
  TTGTCAAGAC ACTAGGGCAA TGCAGGACCT ACTCTGAGTG TAGTTCAAGG AATAACCTAG
  GAAGAAGGGA GAGACCAAGA CACCGTGCTC TGGGAACCAA TCTTTGTGCA GGGTTCCAGT
  W
  GCTGTGGCAA TGTGGGATGA AAACGATGCT CCCAGAGAGC AGAGTCACTG ATTGCCCTTA
  TTCTGCAGCC TTCTCTGAAA CTGCCCAAAG GACAGAGGAA ACCTCAGAGA ACCACAGATG
  CTTAGCCTGG TGGAACTTGT ACACCAGTGT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322295432	CHEV_7_91227088	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258878230					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83727786 () rs orientation: forward

Symbol	Name	Function Class
Cemip	cell migration inducing protein, hyaluronan binding	within coordinates
Tssr73416	transcription start site region 73416	1013 bp upstream