rs258944014 SNP Detail

Summary

• ID
  rs258944014
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30257543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCCTACGT CCTGTCTGGT CCAGTTACTT GGAAAGCAGC
  TTTAGTGCCA CTCAGTGGAG AGACCAACTA AAGACAGAAC CAGGGTGACA GAGCCTTAGG
  Y
  GGGGCCAAGG GCACAGCTGC TACCACTGCT CTTTCTCTCC AACACCTACT CAGGAATCTA
  GGATCTGGAC ACCTTCCATG GACAGCCCTT AGGGTATTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322135258	CHEV_7_31343137	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258944014					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30257543 () rs orientation: forward

Symbol	Name	Function Class
Lin37	lin-37 DREAM MuvB core complex component	within coordinates
Rr400243	regulatory region 400243	1477 bp upstream
Tssr71791	transcription start site region 71791	624 bp downstream
Tssr71792	transcription start site region 71792	655 bp downstream
Tssr71793	transcription start site region 71793	1380 bp downstream
Tssr71794	transcription start site region 71794	1482 bp downstream
Tssr71795	transcription start site region 71795	1710 bp downstream