rs258950972 SNP Detail

Summary

• ID
  rs258950972
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:66989170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGGTTTTT CTTAAAGatc tatctatcta
  tctatctatc tatctatcta tctatctatc tatctaattt atatgggtac gttctcttca
  gacacaccag aagagggcat gagatcccat tgcagatggt tgtgagccac catgtggttg
  M
  tgggaattga actcaggacc tctggaagag cagtcagtgc ttttaaccgc tgagctatct
  ctccaacccA GCAAGTTGTT GTTTTGAGTC TCTATACTAT GTCTTAGCTC TGAGAAGCAG
  AGGTCTTTAG AGTTACAGAG AGCTAACGAC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323718357	CHEV_11_66911846	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258950972					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:66989170 () rs orientation: forward

Symbol	Name	Function Class
Mir6923	microRNA 6923	1460 bp upstream
Myh3	myosin, heavy polypeptide 3, skeletal muscle, embryonic	within coordinates
Rr449421	regulatory region 449421	1944 bp proximal
Tssr102156	transcription start site region 102156	396 bp downstream
Tssr102157	transcription start site region 102157	224 bp upstream