rs258959266 SNP Detail

Summary

• ID
  rs258959266
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121070626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGAGGGA ACATCAATTA
  AGAAAATGCC TCCACACTGT AATTGGTAGG GGTGGCCCTA GCCTACAGTG GGTGATGCCA
  TCTCTGGACT GGTGGTCATG GGTTCTATAA GAAAATAGAC TGAGCAAGAC AGACGAGGCA
  AACCATGCAG AGCAAACCAG TAAGCAGCAC CCATCCGTGG CCTCTACATC AGTTCCTGCC
  K
  CCAGGTCCTT CTCCTAAGTC CTGTCCTGAT TTTCTACAGT GATCTGGAAG TGTTAAGCTA
  AATAAGTCCT TCCTTCCCCA GCTTGCTTTT GGTCATGATA TTTCATCACA GCAATAGAAA
  CCCTAACTAA AGCAAGTTGG TATCAAGATG GTAGGGTATA GTAGGGTAGA GCTATGACAA
  CCCTGACCAT GTTATTTTGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851459	CHEV_14_121232436	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258959266					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121070626 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1063 bp distal
Rr287003	regulatory region 287003	1226 bp distal
Rr287004	regulatory region 287004	975 bp proximal
Rr390218	regulatory region 390218	827 bp downstream
Rr404289	regulatory region 404289	1114 bp downstream