rs258964968 SNP Detail

Summary

• ID
  rs258964968
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60214338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCATTGC ATATGTGGGG
  AAACTGAGGC CCAGCCAAAC AGAAGAAATG ATTTGTCCAA GGACCTACTA TGTTCCTGAC
  AGGGTCAGCA TCCCACCAGC TCCACTAGGC ATTTGTTCTA TTGGCTATTT CTTATTTTAT
  GTATGTATGT ATGTATGTAT GTATGTATGT ATGTATGTAT GTATGTATGT ATGAATATAT
  R
  TATTGAGACA GGGTCTCATG TAGCTCAGGG TGGTCTCAAA TTTAAGATAT AGTTAAGAAT
  GACCTTGAAC TGCTGCTCTG GCCTCTGACA CCTTCTAAGT GTCTGGATGA TAGGCATGTG
  CCTGTACCAT CAAGCCTGGC TCTTCTGACT CTTGTGGCAA GGGTAGGCAG AGCCAGTGGG
  TGCTCACCTT GAGGATGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323325219	CHEV_10_59841307	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258964968					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60214338 () rs orientation: forward

Symbol	Name	Function Class
Cdh23	cadherin related 23 (otocadherin)	within coordinates
Rr432129	regulatory region 432129	1509 bp proximal
Tssr97724	transcription start site region 97724	1663 bp downstream