rs258987046 SNP Detail

Summary

• ID
  rs258987046
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101206567 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGCAATGA ACACGGATGT
  GCAAATATCA CTGTGGTAGG TTACAGAGTT CTCTGGGTAC ATTCCAGGAA CGGGCTAGCT
  GTGCCCTGTG GTCATTCTAT TTTTATTTCT TGCATGTAAC ACTGACTCTT ACAAAGGAGA
  TCCAATGCCA GCCTTCTTCC CTTAATTATT TGCCATGATT GCTTTTCCTC CAGACAACAT
  G
  ATCATGGTGA CTATCTTAGC CTAATCGCCT AATCCCAAGG CCAATGCACT GTATTGTACA
  GATGATTTCA GGAGGAAAGA TGAGCTTGAA CAAATGAGCT TCCTAGGCAG TCTCCAAACT
  TCACATTAAT TAATCATTTC AGCCCTCTTC CTCGGTAAAC TTGTAACCAG AGCAGGTAAC
  AGTGAGCAAA CGGATAGGCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149617	CHEV_9_101231698	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs258987046					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101206567 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	within coordinates
Rr206996	regulatory region 206996	1968 bp distal