rs259007564 SNP Detail

Summary

• ID
  rs259007564
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97114260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGGGCC TTTTGTTTTG
  GTTGTGAGAC TGGACCCTGT TCATGAAGCC CAGACTGGCC TTGAACTTGT GACTGTCCTG
  AATCAGTCTT CCAAGTGCTG TCACTCCTGG CATCTGCTAC CATGCCTGCC TTCTATCAAT
  TTTTAATATT GAACATGGAG CTACTAAGGG ATGATCCCTG GAAATCATCT GTGTTTTTGA
  C
  ATAATCCTAT TCACTTCAAC TGAGTGTCAG AAACCTGGTT TTCCTTGGTT AGTTGGGATT
  AATTATTCCA GGCGAGTATA ATTTCATCTC TTTTGCTTGT TCGTTTGAGG AAGCCAGCTG
  ACCACTGCTA TTTGTCTCAA CCTTCAGCTC AGCCGAACCA CATTAGTCAA TAATAGAAGT
  ATGTGTATGT TCTGAGCAAC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117085	CHEV_9_97132626	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259007564					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97114260 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	1608 bp downstream
Tssr2982	transcription start site region 2982	1960 bp downstream