rs259036945 SNP Detail

Summary

• ID
  rs259036945
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:82924221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTAACTtg ataattaata atagaaataa
  taataataat tatgacaaCT TGGGGGGTCA CTTTGAACTG AGCTTTTCTG TTTCTACCTC
  TTTTGTAGGG CAACTTCAAG TGATCCATAT TATGCTTGGA AGAAAGATGG TGTCCTCAGG
  S
  TCTGTGGTAC CCAGAGCTCA CTAATGTCTA AAGGAGGAAC TAGAACTGGC TGGGGCCTCG
  CAGGTCCTAT ATTCTACCTC CAGAGATTCT GACCTATTCA ACAATCACAT GCTGATGTTC
  AGAAAGCTGG CCAGACTTCA GAATCAAGAA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323044210	CHEV_9_82935775	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259036945					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:82924221 () rs orientation: forward

Symbol	Name	Function Class
Gm39383	predicted gene, 39383	within coordinates
Rr401563	regulatory region 401563	1649 bp upstream