rs259043282 SNP Detail

Summary

• ID
  rs259043282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:30353741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggaaactct ttgccatttt atagcttccc
  caagaacagt cattcctcag agctgagggg gctccttctg aggctcccaa ggatacagaa
  acctaggccg ctcaagtccc tgctgtagaa tggtgtggAT GTggaggatc tctgtgagtt
  Y
  caggtcaggc tggtctatgt aacaagtttc aggccagcta cagctacaca gtaggaGTCA
  CTCCCCACCC CTAGTAGCTA CACAGTAGGa cacacacaca cacacacaca cacacacaca
  cacgcacgca cCATCTCAAA GGAAAAGAAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325130494	CHEV_16_30535009	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259043282					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:30353741 () rs orientation: forward

Symbol	Name	Function Class
Gm60148	predicted gene, 60148	1479 bp downstream
Rr514267	regulatory region 514267	207 bp proximal
Rr514268	regulatory region 514268	751 bp proximal
Tmem44	transmembrane protein 44	within coordinates
Tssr137879	transcription start site region 137879	1143 bp upstream