rs259085277 SNP Detail

Summary

• ID
  rs259085277
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32602707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTTGTTAG GGGCTTCTGC TGCACGGTTG
  TTCAAGAACA CGGGTCTCCT GTCATCTGTG CCAATGCCCC CCTTCCTCCA TCCATTAATC
  CAGTGTAGCG GACTTAAATT GAGATCCAAA TGATAGGATC CCCACAGCCT TACAGGACAG
  W
  CCACATTTCT ACATTCCCTA GCCCAGAAAA CAATGACAGG CACGAAAAGA TGTTCAGTGA
  GATTAAGAAA ATGGGCTGAC CCTGGGTGTG AAGAAGGCTC CCGAACTCTG CAGTTTTGAT
  TGGCAGCTCC TCTTCGTTTT CTGTCTGTGC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322892002	CHEV_9_32498996	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259085277					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32602707 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr199954	regulatory region 199954	694 bp proximal
Rr203547	regulatory region 203547	1388 bp proximal