rs259156819 SNP Detail

Summary

• ID
  rs259156819
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:38122061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgaaaacct tgatgttgca tcaaaataaa
  ttctgtatca aaataagtta tgacttcaac ttagtaacaa ttaaaatgat ttctaccaaa
  tgagattatg cctatacaat caattctagc tatttcctcc ctgttccaat tatgaccatt
  Y
  ctaaattccc tagaaagaca acctataata accacttcca gccccaaagc ccaggaactg
  gggcgatgac tctttgtaac ttattcaggc tgaatatggg cattgagata ttttgaatcg
  gtgcgggtgg ggagataggg gagttgttgg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324319272	CHEV_13_38029954	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259156819					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:38122061 () rs orientation: forward

Symbol	Name	Function Class
Rr271603	regulatory region 271603	1861 bp distal
Rr283322	regulatory region 283322	1341 bp proximal
Rreb1	ras responsive element binding protein 1	within coordinates
Tssr119340	transcription start site region 119340	1084 bp downstream