rs259160632 SNP Detail

Summary

• ID
  rs259160632
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3730286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAAGAAA AAAGAAACTG
  GCCCACAGCA GGCTGGCCCA CAGCCTGATC TCATGTTCTT AGTTGAGGTT CTCTCCTCTT
  AGATGATGTT AGCTTGTGTG ACATAAATCT CTCCAGCATA AAAGCTAATT GAAGAATGGA
  GGGGACACCT CTCGGCATAA AAGTGTGGGT GGCTGTTAGT TTGGGCTGCT AGATGTTGAG
  W
  GTCTTAAGTG ACCATCATTC CCTTCTTATT TAGAGGCAGA GAATGCCAGG ATGAAGGCAC
  TGTCAGGGTC AGAGTTAGGA AGGGCCTGCA TTCAGGTTTA TGGATACTTC TTGCTATATC
  CTGACATGGC AGAGAGGAAA AGTAAAACAC TTTTCTTCAT CCCTTCTCCA AGGGTGTGAA
  TTCATCACAA GGGCTCGACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320205109	CHEV_2_3646521	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259160632					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3730286 () rs orientation: forward

Symbol	Name	Function Class
Fam107b	family with sequence similarity 107, member B	within coordinates
Rr367092	regulatory region 367092	1444 bp downstream
Tssr15912	transcription start site region 15912	1708 bp upstream
Tssr15913	transcription start site region 15913	1813 bp upstream