rs259212670 SNP Detail

Summary

• ID
  rs259212670
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99241095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGTCCTTA AAGCCTTGCT TTTCTCTCTT
  AAACTATTTG TTACTTAAGC CATCTGGACC CAGCTCCCAG CACAGTCAAA CTGAGCTTAG
  GGACCATTCT CTACCCCACC CCCACTCCCA TCCTCAGCGT CATTTTAAAA ACCCTGTCTG
  S
  AGGGGAGTTG GTCAGTGCCT TTCCTTTCTG GGACTGGGAG CGTCCAGGAA ACCGGCCATC
  TTCACTCATA GTCATTTACT CTCTCTTGGT GCACCCAGAG AGGGCAAGCG ACCTGCGAAT
  GGAAAAAGAA AGAGGAAGCC AGCCTTGAGG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135610	CHEV_9_99259461	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259212670					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99241095 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22193	CpG island 22193	337 bp distal
Esyt3	extended synaptotagmin-like protein 3	485 bp upstream
Rr198328	regulatory region 198328	1706 bp proximal
Rr206935	regulatory region 206935	294 bp distal
Tssr91051	transcription start site region 91051	490 bp upstream