rs259231234 SNP Detail

Summary

• ID
  rs259231234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45174801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAT TGTTTCAGTT CCACTGCACT
  R
  TTTTGGGGTT CATGCCATTT GTATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322942716	CHEV_9_45071586	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259231234					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45174801 () rs orientation: forward

Symbol	Name	Function Class
Il10ra	interleukin 10 receptor, alpha	within coordinates
Rr677873	regulatory region 677873	1704 bp distal
Tssr84758	transcription start site region 84758	1379 bp upstream
Tssr89253	transcription start site region 89253	564 bp upstream
Tssr89254	transcription start site region 89254	495 bp upstream
Tssr89255	transcription start site region 89255	435 bp upstream
Tssr89256	transcription start site region 89256	404 bp upstream
Tssr89257	transcription start site region 89257	673 bp downstream
Tssr89258	transcription start site region 89258	714 bp downstream
Tssr89259	transcription start site region 89259	737 bp downstream