rs259291725 SNP Detail

Summary

• ID
  rs259291725
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:6609417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTACTGGTG TTTTGCTTAT
  CTATTATGAT TTCTGATTTT GTGTTTTTAT GGGTTTTGTG TGTATGTGTG TCTTTGTGTC
  TACATGTGCA TGTGTTTTTC CAGCTTTTCT TTCCTCTCTT TTTGTTTCGT TTTGTTGTTG
  TTGTTGTTCT GTTTGCTATG TGTGGGTCTT ATTTTGTTTT GTTTTGGTTT CTATTTTATG
  R
  CCTGTATTAT AGTTAGGGTT ACTAATACTG TGATAAAACA CCATGAACAA ATCAACTTGG
  GGAGGAAAGG GTTTATTAGA CATTCCCTTC CCACTCACTG TTCATCACTA AAGGAAGTCA
  GGAAAGGAAC TGAAACATGA CAAGAACCTG GAAGTGGGAG CTGATGTAGT GGCTGTGGCT
  TGCTCATCAT GGTTTGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321732605	CHEV_6_6559417	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259291725					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6609417 () rs orientation: forward

Symbol	Name	Function Class
Gm66705	predicted gene, 66705	1325 bp upstream