rs259292062 SNP Detail

Summary

• ID
  rs259292062
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:66988670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATAAATA AATAAATTTT
  TTAAAAAAGG AATTCATTTG TCTTCTGGAT ATGGCAGCAG TTACTGATTG ATTATCTAGA
  ATAAGCTAAT GGAATAACAT CTTTGCTTAT TCAGTGATCT AGACCAGGCA ATGGTAGAGA
  ACCCTAACTC TGAGAGTAGC CACTTCAGGG GTGACATTCT GTTAGATGCT TGGCAGAGAG
  Y
  TCACTGACAG AACCTCTCCA CGATGCTGCT GCAGGTGCTA GCTGAGTGGA AGACGAAGTG
  TGAGGAGAGC CAAGCCGAGC TGGAGGCAGC TCTCAAGGAA TCCCGGTCCT TGAGCACTGA
  GCTCTTCAAA CTGAAGAATG CCTATGAAGA AGCCTTGGAT CAACTTGAAA CCGTGAAACG
  GGAGAATAAG AACTTAGAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323718349	CHEV_11_66911346	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259292062					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:66988670 () rs orientation: forward

Symbol	Name	Function Class
Mir6923	microRNA 6923	1960 bp upstream
Myh3	myosin, heavy polypeptide 3, skeletal muscle, embryonic	within coordinates
Tssr102156	transcription start site region 102156	50 bp upstream
Tssr102157	transcription start site region 102157	724 bp upstream